RARB

(Retinoic acid receptor, beta)

 

  • Alias                                 (According to NCBI)

 

  • HAP,
  • NR1B2,
  • RRB2
  • HBV-activated protein;
  • RAR-epsilon;
  • hepatitis B virus activated protein;
  • retinoic acid receptor beta 2;
  • retinoic acid receptor beta 4;
  • retinoic acid receptor beta 5;
  • retinoic acid receptor,
  • beta polypeptide
  • This is a receptor for retinoic acid. This metabolite has profound effects on vertebrate development. Retinoic acid is a morphogen and is a powerful teratogen. This receptor controls cell function by directly regulating gene expression.
  • Location: 3p24
  • Size: 169667 bp
  • exons: 

          Isoform A :- 7

          Isoform B :- 5

  • CGH (3p24):  Losses (%) -29.6   Gain (%)  0.6  

  • Mutations and SNPs (According to HGMD and SNP)

 

 

  • m-RNA                       (According to NCBI and CGAP)

 

  • mRNA sequence (Human):  

          Trancript varient 1 : NM_000965.2&

          Transcript varient 2: NM_016152.2

  • Size:

         

          Trancript varient 1 : 3119

          Transcript varient 2: 2762

  • cDNA libraries: RARB

  • Size: 455 amino acids ; 50489 Da
  • Catalytic activity:
  • Subcellular location:

    Isoform Beta-1: Nucleus.

    Isoform Beta-2: Nucleus.

    Isoform Beta-4: Cytoplasm

  • Protein domains

     

  • Pathways and interactions (According to kegg, IntAct)

 

  • Pathway:

          Small cell lung cancer

          Non-small cell lung cancer

                        

  • Protein interactions: RARB

  • Clinical                            (According to OMIM, PubMed)