USF1

(upstream transcription factor 1)

 

  • Alias                                 (According to NCBI)

 

 
  • RP11-544M22.5,
  • FCHL,
  • FCHL1,
  • HYPLIP1,
  • MLTF,
  • MLTFI,
  • UEF
  • major late transcription factor 1;
  • upstream stimulatory factor 1

 

  • Transcription factor that binds to a symmetrical DNA sequence (E-boxes) (5'-CACGTG-3') that is found in a variety of viral and cellular promoters.
  • Location: 1q22-q23
  • Size: 6717 bp
  • exons:

          Transcript variant 1 : 10

          Transcript variant 2:  7

  • CGH (1q22):  Losses (%) -17.9   Gain (%)  8.9  

  • Mutations and SNPs (According to HGMD and SNP)

 

 

  • m-RNA                       (According to NCBI and CGAP)

 

  • mRNA sequence (Human):  

          Transcript variant 1 : NM_007122.3

          Transcript variant 2:  NM_207005.1

  • Size:

          Transcript variant 1 : 1831

          Transcript variant 2:  1800

  • cDNA libraries: USF1

  • Size: 310 amino acids; 33538 Da
  • Catalytic Subunit: Efficient DNA binding requires dimerization with another bHLH protein. Binds DNA as an homodimer or a heterodimer (USF1/USF2). Interacts with varicella-zoster virus IE62 protein.
  • Subcellular location: Nucleus

  • Protein domains

     

 

  • Pathways and interactions (According to PIR)

 

  • Pathway:

                        

  • Protein interactions: USF1

 
  • Clinical                            (According to OMIM, PubMed)