- Ashar S, Lipsa A, Khan N, Sarin R (2022). High cumulative risk of colorectal cancers and desmoid tumours and fibromatosis in South Asian APC mutation carriers. Journal of Medical Genetics. 59(5):492-495. PMID: 33766935
- Deo A, Thorat R, Dhadve A, De A, Rekhi B, Ray P. (2022) IGF1R-α6 integrin-S100A4 network governs the organ-specific metastasis of chemoresistant epithelial ovarian cancer cells. Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease.1868 (1): 166282. PMID: 34600083
- Khan MA, Siddiqui MQ, Kuligina E, Varma AK (2022). Evaluation of conformational transitions of h-BRCA2 functional domain and unclassified variant Arg2502Cys using multimodal approach. International Journal of Biological Macromolecules
- Mukherjee S, Maddalena M, Lü Y, Martinez S, Nataraj NB, Noronha A, Sinha S, Teng K, Cohen-Kaplan V, Ziv T, Arandkar S, Hassin O, Chatterjee R, Pirona AC, Shreberk-Shaked M, Gershoni A, Aylon Y, Elazar Z, Yarden Y, Schramek D, Oren M. Cross-talk between mutant p53 and p62/SQSTM1 augments cancer cell migration by promoting the degradation of cell adhesion proteins. Proceedings of the National Academy of Sciences. 119(17):e2119644119
- Mulla SW, Venkatraman P (2022). Novel Nexus with NFκB, β-catenin, and RB1 empowers PSMD10/Gankyrin to counteract TNF-α induced apoptosis establishing its oncogenic role. International Journal of Biochemistry & Cell Biology. 146: 106209. PMID: 35378311
- Poojari R, Mohanty B, Kadwad V, Suryawanshi D, Chaudhari P, Khade B, Srivastava R, Gupta S, Panda D.(2022) Combinatorial Cetuximab targeted polymeric nanocomplexes reduce PRC1 level and abrogate growth of metastatic hepatocellular carcinoma in vivo with efficient radionuclide uptake. Nanomedicine: Nanotechnology, Biology and Medicine.PMID: 35104671
- Reddy D, Bhattacharya S, Shah S, Rashid M, Gupta S (2022). DNA methylation mediated downregulation of histone H3 variant H3.3 affects cell proliferation contributing to the development of HCC.Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease.1868: 166284
- Sanapalli B, Yele V, Sigalapalli D, Gadewal N, Shaik A, Bhandare R, Annadurai S, Karri VVSR. (2021) Forging of nicotine for the effective management of diabetic wounds: A hybrid of scaffold hopping and molecular dynamics simulation approaches. Arabian Journal of Chemistry. 15(2): 103585
- Sthanam L, Roy T, Patwardhan S, Shukla A, Sharma S, Shinde P, Kale H, Shekar P, Kondabagil K, Sen S. (2022).MMP modulated differentiation of mouse embryonic stem cells on engineered cell derived matrices. Biomaterials. 280: 121268
- Augustine S, Sooraj KP, Pachchigar V, CM krishna, Ranjan M (2021). SERS based detection of Dichlorvos pesticide using silver nanoparticles arrays: Influence of array wavelength/amplitude. Applied Surface Science. 544: 148878
- Bishnu A, Phadte P, Dhadve A, Sakpal A, Rekhi B, Ray P (2021). Molecular imaging of the kinetics of hyperactivated ERK1/2-mediated autophagy during acquirement of chemoresistance. Cell death & disease, 12(2):161. PMID: 33558461
- Bose K, Wagh A, Mishra V, Dutta S, Parui A, Puja R, Pandav-Mudrale S, Kulkarni S, Gai P, Sarin R (2021). Loss of GSK-3β mediated phosphorylation in HtrA2 contributes to uncontrolled cell death with Parkinsonian phenotype. International Journal of Biological Macromolecules. 180: 97-111. PMID: 33716130
- Iwasaki K, Araki A, CM Krishna, Maruyama R, Yamamoto T, Noothalapati H.Identification of molecular basis for objective discrimination of breast cancer cells (MCF-7) from normal human mammary epithelial cells by Raman Microspectroscopy and multivariate curve resolution analysis. International Journal of Molecular Sciences. 22(2): 800. PMID: 33466869
- Mhatre O, Reddy BP, Patnaik C, Chakrabarty S, Ingle A, De A, Srivastava R (2021). pH-Responsive Delivery of Anti-Metastatic Niclosamide Using Mussel Inspired Polydopamine Nanoparticles, International Journal of Pharmaceutics. 597: 120278
- Poojari R, Bhujbal M, Hole A, CM Krishna (2021). Distinct stratification of normal liver, Hepatocellular carcinoma (HCC), and anticancer nanomedicine treatment in tumour tissues by Raman fingerprinting for HCC therapeutic monitoring. Nanomedicine: Nanotechnology, Biology and Medicine. 33: 102352. PMID: 33418135-
- Navalkar A, Pandey S, Singh N, Patel K, Datta D, Mohanty B, Jadhav S, Chaudhari P, Maji S (2021). Direct evidence of cellular transformation by prion-like p53 amyloid infection. Journal of Cell Science. 134 (11): jcs258316 PMID: 34085695
- Deogharkar A, Singh SV, Bharambe HS, Paul R, Moiyadi A, Goel A, Shetty P, Sridhar E, Gupta T, Jalali R, Goel N, Gadewal N, Muthukumar S, Shirsat NV (2021). Downregulation of ARID1B, a tumor-suppressor in the WNT subgroup medulloblastoma, activates multiple oncogenic signaling pathways. Human Molecular Genetics. 30(18):1721-1733. PMID: 33949667
- Sulkshane P, Pawar SN, Waghole R, Pawar SS, Rajput P, Uthale A, Oak S, Kalkar P, Wani H, Patil R, Nair S, Rane P, Teni T (2021). Elevated USP9X drives early-to-late-stage oral tumorigenesis via stabilisation of anti-apoptotic MCL-1 protein and impacts outcome in oral cancers. British Journal of Cancer. 125(4):547-560. PMID: 34079080
- Maddalena M, Mallel G, Nataraj NB, Shreberk-Shaked M, Hassin O, Mukherjee S, Arandkar S, Rotkopf R, Kapsack A, Lambiase G, Pellegrino B, Ben-Isaac E, Golani O, Addadi Y, Hajaj E, Eilam R, Straussman R, Yarden Y, Lotem M, Oren M (2021). TP53 missense mutations in PDAC are associated with enhanced fibrosis and an immunosuppressive microenvironment. Proceedings of the National Academy of Sciences. 118(23):e2025631118. PMID: 34088837
- Chaudhary N, Choudhary BS, Shah SG, Khapare N, Dwivedi N, Gaikwad A, Joshi N, Raichanna J, Basu S, Gurjar M, Smitha PK, Saklani A, Gera P, Ramadwar M, Patil P, Thorat R, Gota V, Dhar SK, Gupta S, Das M, Dalal SN (2021). Lipocalin 2 expression promotes tumor progression and therapy resistance by inhibiting ferroptosis in colorectal cancer. International Journal of Cancer. 149(7):1495-1511.PMID: 34146401
- Desai S, Rashmi S, Rane A, Dharavath B, Sawant A, Dutt A (2021). An integrated approach to determine the abundance, mutation rate and phylogeny of the SARS-CoV-2 genome. Briefings in Bioinformatics. 22(2):1065-1075. PMID: 33479725
- Mishra SK, Hole A, Reddy BPK, Srivastava R, CM Krishna, De A.( 2021) Raman Micro-spectroscopic Map estimating in vivo precision of tumor ablative effect achieved by photothermal therapy procedure. Nanomedicine: Nanotechnology, Biology and Medicine. 37:102437. PMID: 34273597
- Patwardhan S, Mahadik P, Shetty O, Sen S (2021). ECM stiffness-tuned exosomes drive breast cancer motility through thrombospondin-1. 279: 121185.Biomaterials.PMID: 34808560
- Ho KYL, Khadilkar RJ, Carr RL, Tanentzapf G (2021). A gap-junction-mediated, calcium-signaling network controls blood progenitor fate decisions in hematopoiesis. Current Biology.31 (21):4697-4712. PMID: 34480855
- Nair J, Syed SB, Mahaddalkar T, Ketkar M, Thorat R, Sastri Goda J, Dutt S (2021). DUSP6 regulates radio-sensitivity in glioblastoma by modulating the recruitment of p-DNAPKcs at DNA double-strand breaks. Journal of Cell Science 134 (24): jcs259520. PMID: 34792128
- Sandbhor P, Goda J, Mohanty B, Chaudhari P, Dutt S, Banerjee R (2021). Non-invasive transferrin targeted nanovesicles sensitize resistant glioblastoma multiforme tumors and improve survival in orthotopic mouse models. Nanoscale. 14(1): 108-126. PMID: 34897360
- Benor G, Fuks G, Chin SF, Rueda OM, Mukherjee S, Arandkar S, Aylon Y, Caldas C, Domany E, Oren M (2020). Transcriptional profiling reveals a subset of human breast tumors that retain wt TP53 but display mutant p53-associated features. Molecular Oncology. 14(8):1640-1652. PMID: 32484602
- Ghorai A, Mahddalkar T, Thorat R, Dutt S (2020). Sustained inhibition of PARP-1 activity delays glioblastoma recurrence by enhancing radiation-induced senescence. Cancer Letters. 490:44-53. PMID: 32645394
- Patel U, Pandey M, Kannan S, Samant TA, Gera P, Mittal N, Rane S, Patil A, Noronha V, Joshi A, Patil VM, Prabhash K, Mahimkar MB (2020). Prognostic and predictive significance of nuclear HIF1α expression in locally advanced HNSCC patients treated with chemoradiation with or without nimotuzumab. British Journal of Cancer. PMID: 32939054
- Chowdhury SR, Bhattacharjee C, Casier JC, Jain BK, Glick BS, Bhattacharyya D (2020) - ER arrival sites associate with ER exit sites to create bidirectional transport portals. Journal of Cell Biology. 219 (4): e201902114. PMID: 32328626
- Kumar R, George B, Campbell MR, Verma N, Paul AM, Melo-Alvim C, Ribeiro L, Pillai MR, da Costa LM, Moasser MM. HER family in cancer progression: From discovery to 2020 and beyond. Advances in Cancer Research. 147:109-160. PMID: 32593399.
- Kaur E, Nair J, Ghorai A, Mishra SV, Achareker A, Ketkar M, Sarkar D, Salunkhe S, Rajendra J, Gardi N, Desai S, Iyer P, Thorat R, Dutt A, Moiyadi A, Dutt S(2020). Inhibition of SETMAR-H3K36me2-NHEJ repair axis in residual disease cells prevent glioblastoma recurrence. Neuro-Oncology. PMID: 32458986
- Khadilkar R, Ho K, Venkatesh B, Tanetzapf G (2020). Integrins modulate extracellular matrix organization to control cell signaling during hematopoiesis. Current Biology. PMID: 32649911
- Kholiya F, Chatterjee S, Bhojani G, Sen S, Barkume M, Kasinathan NK, Kode J, Ramavatar M (2020). Seaweed polysaccharide derived bioaldehyde nanocomposite: Potential application in anticancer therapeutics. Carbohydrate Polymers. PMID: 32475566
- Laxman K, Reddy BPK, Mishra SK, Gopal MB, Robinson A, De A, Srivastava R, Ravikanth M (2020). BF2-Oxasmaragdyrin Nanoparticles: A Non-toxic, Photostable, Enhanced Non-radiative Decay-Assisted Efficient Photothermal Cancer Theragnostic Agent. ACS Applied Materials and Interfaces. 12(47):52329-52342. PMID: 33170618
- Laxman K, Reddy PK, Mishra SK, Robinson A, De A, Srivastava R, Ravikanth M (2020). Bioinspired carrier-free peptide conjugated BF2-oxasmaragdyrin dye-based nano self-assemblies: a photostable NIR cancer theragnostic agent. NPG Asia Materials. 12:75.
- Mukherjee S, Agarwal M, Bakshi A, Sawant S, Thomas L, Fujii N, Nair P, Kode J (2020).Chemokine SDF1 Mediated Bone Regeneration Using Biodegradable Poly(D,L-lactide-co-glycolide) 3D Scaffolds and Bone Marrow-Derived Mesenchymal Stem Cells: Implication for the Development of an “Off-the-Shelf” Pharmacologically Active Construct. Biomacromolecules. 21(12):4888-4903. PMID: 33136384
- Sharda A, Rashid M, Shah SG, Sharma AK, Singh SR, Gera P, CM Krishna, Gupta S (2020). Elevated HDAC activity and altered histone phospho-acetylation confer acquired radio-resistant phenotype to breast cancer cells. Clinical Epigenetics. 12(1): 4. PMID: 31900196
- Salunkhe S, Chandran N, Chandrani P, Dutt A, Dutt S (2020). CytoPred: 7-gene pair metric for AML cytogenetic risk prediction. Briefings in Bioinformatics. 21(1): 348-354. PMID: 30380003
- Alfonso V, Iaccarino L, Ottone T, Cicconi L, Lavorgna S, Divona M, Cairoli R, Cristiano A, Ciardi C, Travaglini S, Falconi G, Hasan SK, Venditti A, Arcese W, Voso MT, Lo-Coco F (2019). Early and sensitive detection of PML-A216V mutation by droplet digital PCR in ATO-resistant acute promyelocytic leukemia. Leukemia. 33(6): 1527-1530. PMID: 30651632
- Das D, Ghosh S, Maitra A, Biswas NK, Panda CK, Roy B, Sarin R, Majumder PP (2019) – Epigenomic dysregulation-mediated alterations of key biological pathways and tumor immune evasion are hallmarks of gingivo-buccal oral cancer. Clinical Epigenetics. 11: 178. PMID: 31796082
- Kaur E, Goda JS, Ghorai A, Salunkhe S, Shetty P, Moiyadi A, Sridhar E, Mahajan A, Jalali R, Dutt S (2019) - Molecular features unique to glioblastoma radiation resistant residual cells may affect patient outcome - A short report. Cellular oncology (Dordrecht). 42(1): 107-116. PMID: 30361826
- Patel S, Rajora N, Kumar S, Sahu A, Kochar S, CM Krishna, Srivastava S (2019) - Rapid discrimination of malaria and dengue infected patients sera using Raman Spectroscopy. Analytical Chemistry. 91(11): 7054-7062. PMID: 31033270
- Patil VM, Noronha V, Joshi A, Agarwal J, Ghosh-Laskar S, Budrukkar A, Murthy V, Gupta T, Mahimkar M, Juvekar S, Arya S, Mahajan A, Agarwal A, Purandare N, Rangarajan V, Balaji A, Chaudhari SV, Banavali S, Kannan S, Bhattacharjee A, D'Cruz AK, Chaturvedi P, Pai PS, Chaukar D, Pantvaidya G, Nair D, Nair S, Deshmukh A, Thiagarajan S, Mathrudev V, Manjrekar A, Dhumal S, Maske K, Bhelekar AS, Nawale K, Chandrasekharan A, Pande N, Goel A, Talreja V, Simha V, Srinivas S, Swami R, Vallathol DH, Dsouza H, Shrirangwar S, Turkar S, Abraham G, Thanky AH, Patel U, Pandey MK, Prabhash K (2019) - A randomized phase 3 trial comparing nimotuzumab plus cisplatin chemoradiotherapy versus cisplatin chemoradiotherapy alone in locally advanced head and neck cancer. Cancer. 125 (18): 3184-3197. PMID: 31150120
- Varshney N, Som S, Chatterjee S, Sridhar S, Bhattacharyya D, Paul R, Sanyal K (2019) - Spatio-temporal regulation of nuclear division by Aurora B kinase Ipl1 in Cryptococcus neoformans. PLoS Genetics. 15(2): e1007959, PMID: 30763303
- Chauhan DS, Arunkumar P, Prasad R, Mishra S, Pradeep B, Reddy K, De A, Srivastava R (2018). Facile synthesis of plasmonic zein nanoshells for imaging-guided photothermal cancer therapy. Materials Science & Engineering C-Materials for Biological Applications. 90: 539-548. PMID: 29853123
- Ottone T, Alfonso V, Iaccarino L, Hasan SK, Mancini M, Divona M, Lavorgna S, Cicconi L, Panetta P, Maurillo L, Del Principe MI, Irno Consalvo M, Franceschini L, Francesca Angelini D, Battistini L, Guerrera G, De Bardi M, Fabiani E, Falconi G, Arcese W, Amadori S, Buccisano F, Venditti A, Voso MT, Lo-Coco F (2018). Longitudinal detection of DNMT3AR882H transcripts in patients with acute myeloid leukemia. American Journal of Hematology. 93(5): E120-123. PMID: 29417611
- Salunkhe S, Mishra SV, Nair J, Ghosh S, Choudhary N, Kaur E, Shah S, Patkar K, Anand D, Khattry N, Hasan SK, Dutt S. Inhibition of novel GCN5-ATM axis restricts the onset of acquired drug resistance in leukemia. International Journal of Cancer. 142(10): 2175-85, 2018. PMID: 29297932
- Shrimali P, Peter M, Singh A, Dalal N, Dakave S, Chiplunkar SV, Tayalia P (2018). Efficient in situ gene delivery via PEG diacrylate matrices. Biomaterials Science. 6(12): 3241-3250. PMID: 30334035
- Reddy A, Zhang J, Davis NS, Moffitt AB, Love CL, Waldrop A, Leppa S, Pasanen A, Meriranta L, Karjalainen-Lindsberg ML, Nørgaard P, Pedersen M, Gang AO, Høgdall E, Heavican TB, Lone W, Iqbal J, Qin Q, Li G, Kim SY, Healy J, Richards KL, Fedoriw Y, Bernal-Mizrachi L, Koff JL, Staton AD, Flowers CR, Paltiel O, Goldschmidt N, Calaminici M, Clear A, Gribben J, Nguyen E, Czader MB, Ondrejka SL, Collie A, Hsi ED, Tse E, Au-Yeung RKH, Kwong YL, Srivastava G, Choi WWL, Evens AM, Pilichowska M, Sengar M, Reddy N, Li S, Chadburn A, Gordon LI, Jaffe ES, Levy S, Rempel R, Tzeng T, Happ LE, Dave T, Rajagopalan D, Datta J, Dunson DB, Dave SS (2017). Genetic and Functional Drivers of Diffuse Large B cell Lymphoma. Cell. 171(2): 481-494. PMID: 28985567
- Thakur B, Ray P (2017). Cisplatin triggers cancer stem cell enrichment in platinum-resistant cells through NF-κB-TNFα-PIK3CA loop. Journal of Experimental and Clinical Cancer Research. 36(1): 164. PMID: 29169370
- Mir R, Pradhan SJ, Patil P, Mulherkar R, Galande S (2016). Wnt/β-catenin signaling regulated SATB1 promotes colorectal cancer tumorigenesis and progression. Oncogene. 35(13): 1679- 91 . PMID: 26165840
- Parashurama N, Ahn BC, Ziv K, Ito K, Paulmurugan R, Willmann JK, Chung J, Ikeno F, Swanson JC, Merk DR, Lyons JK, Yerushalmi D, Teramoto T, Kosuge H, Dao CN, Ray P, Patel M, Chang YF, Mahmoudi M, Cohen JE, Goldstone AB, Habte F, Bhaumik S, Yaghoubi S, Robbins RC, Dash R, Yang PC, Brinton TJ, Yock PG, McConnell MV, Gambhir SS (2016). Multimodality molecular imaging of cardiac cell transplantation: Part II. In vivo imaging of bone marrow stromal cells in swine with PET/CT and MR imaging. Radiology. 280(3): 826-36. PMID: 27332865
- Parashurama N, Ahn BC1, Ziv K, Ito K, Paulmurugan R, Willmann JK, Chung J, Ikeno F, Swanson JC, Merk DR, Lyons JK, Yerushalmi D, Teramoto T, Kosuge H, Dao CN, Ray P, Patel M, Chang YF, Mahmoudi M1, Cohen JE, Goldstone AB, Habte F, Bhaumik S, Yaghoubi S, Robbins RC, Dash R, Yang PC, Brinton TJ, Yock PG, McConnell MV, Gambhir SS (2016). Multimodality molecular imaging of cardiac cell transplantation: Part I. reporter gene design, characterization, and optical in vivo imaging of bone marrow stromal cells after myocardial infarction. Radiology. 280(3): 815-825. PMID: 27332865
- Patil RS, Shah SU, Shrikhande SV, Goel M, Dikshit R, Chiplunkar SV (2016). IL17 producing γδT cells induce angiogenesis and are associated with poor survival in gallbladder cancer patients. International Journal of Cancer. 139(4): 869-881. PMID: 27062572
- Singh N, Hassan A, Bose K (2016). Molecular basis of death effector domain chain assembly and its role in caspase-8 activation. FASEB Journal. 30(1): 186-200. PMID: 26370846
- Thakur B, Ray P (2016). p53 loses grip on PIK3CA expression leading to enhanced cell survival during platinum resistance. Molecular Oncology. 10(8): 1283-95. PMID: 27401370
- Bodini M, Ronchini C, Giacò L, Russo A, Melloni GE, Luzi L, Sardella D, Volorio S, Hasan SK, Ottone T, Lavorgna S, Lo-Coco F, Candoni A, Fanin R, Toffoletti E, Iacobucci I, Martinelli G, Cignetti A, Tarella C, Bernard L, Pelicci PG, Riva L.The hidden genomic landscape of acute myeloid leukemia: subclonal structure revealed by undetected mutations.Blood 125(4): 600-605, 2015. PMID: 25499761
- Delahaye-Sourdeix M, Anantharaman D, Timofeeva MN, Gaborieau V, Chabrier A, Vallée MP, Lagiou P, Holcátová I, Richiardi L, Kjaerheim K, Agudo A, Castellsagué X, Macfarlane TV, Barzan L, Canova C, Thakker NS, Conway DI, Znaor A, Healy CM, Ahrens W, Zaridze D, Szeszenia-Dabrowska N, Lissowska J, Fabianova E, Mates IN, Bencko V, Foretova L, Janout V, Curado MP, Koifman S, Menezes A, Wünsch-Filho V, Eluf-Neto J, Boffetta P, Fernández Garrote L, Polesel J, Lener M, Jaworowska E, Lubiński J, Boccia S, Rajkumar T, Samant TA, Mahimkar MB, Matsuo K, Franceschi S, Byrnes G, Brennan P, McKay JD. A rare truncating BRCA2 variant and genetic susceptibility to upper aerodigestive tract cancer. Journal of National Cancer Institute. 107(5): djv037. PMID: 25838448
- Kaur E, Rajendra J, Jadhav S, Sridhar E, Goda J, Moiyadi A, Dutt S (2015). Radiation induced homotypic cell fusions of innately resistant glioblastoma cells mediate their sustained survival and recurrence. Carcinogenesis.36(6):685-695. PMID: 25863126
- Nakka KK, Chaudhary N, Joshi S, Bhat J, Singh K, Chatterjee S, Malhotra R, De A, Santra MK, Dilworth FJ, Chattopadhyay S. Nuclear matrix-associated protein SMAR1 regulates alternative splicing via HDAC6-mediated deacetylation of Sam68. Proceedings of National Academy of Sciences. 112(26):E3374-E3383 PMID: 26080397
- Rengan AK, Bukhari AB, Pradhan A, Malhotra R, Banerjee R, Srivastava R, De A (2015). In Vivo Analysis of Biodegradable Liposome Gold Nanoparticles as Efficient Agents for Photothermal Therapy of Cancer. Nanoletters .15(2):842-848. PMID: 25554860
- Shete H, Sable S, Tidke P, Selkar N, Pawar Y, Chakraborty A, De A, Vanage G, Patravale V (2015). Mono-guanidine heterolipid based SMEDDS : A promising tool for cytosolic delivery of antineoplastics. Biomaterials. 57: 116-132. PMID: 25916500
